Rsamtools-package {Rsamtools} | R Documentation |
'samtools' aligned sequence utilities interface
Description
This package provides facilities for parsing samtools BAM (binary) files representing aligned sequences.
Details
See packageDescription('Rsamtools')
for package details. A
useful starting point is the scanBam
manual page.
Note
This package documents the following classes for purely internal
reasons, see help pages in other packages: bzfile
, fifo
,
gzfile
, pipe
, unz
, url
.
Author(s)
Author: Martin Morgan
Maintainer: Biocore Team c/o BioC user list <bioconductor@stat.math.ethz.ch>
References
The current source code for samtools and bcftools is from https://github.com/samtools/samtools. Additional material is at http://samtools.sourceforge.net/.
Examples
packageDescription('Rsamtools')
[Package Rsamtools version 2.18.0 Index]